HL_8JDJ_085

3D structure

PDB id

8JDJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CUUCGCGG

Length

8 nucleotides

Bulged bases

8JDJ|1|w|U|198, 8JDJ|1|w|C|199

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8JDJ|1|w|C|196
8JDJ|1|w|U|197
8JDJ|1|w|U|198
8JDJ|1|w|C|199
8JDJ|1|w|G|200
8JDJ|1|w|C|201
8JDJ|1|w|G|202
8JDJ|1|w|G|203

Current chains

Chain w

18S ribosomal RNA

Nearby chains

Chain 5

40S ribosomal protein S8