HL_8JSH_005

3D structure

PDB id

8JSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 30S-body-IF3 complex from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

8JSH|1|g|U|209

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8JSH_005 not in the Motif Atlas

Geometric match to HL_6CK5_001

Geometric discrepancy: 0.2609

The information below is about HL_6CK5_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

60

Unit IDs

8JSH|1|g|C|207
8JSH|1|g|U|208
8JSH|1|g|U|209
8JSH|1|g|C|210
8JSH|1|g|G|211
8JSH|1|g|G|212

Current chains

Chain g

16S ribosomal RNA

Nearby chains