HL_8JSH_024
3D structure
- PDB id
- 8JSH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 30S-body-IF3 complex from Escherichia coli
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.4 Å
Loop
- Sequence
- UUUGAUCAUGG
- Length
- 11 nucleotides
- Bulged bases
- 8JSH|1|g|U|13, 8JSH|1|g|U|14
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8JSH_024 not in the Motif Atlas
- Homologous match to HL_4LFB_001
- Geometric discrepancy: 0.2546
- The information below is about HL_4LFB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89881.5
- Basepair signature
- cWW-tHW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8JSH|1|g|U|12
8JSH|1|g|U|13
8JSH|1|g|U|14
8JSH|1|g|G|15
8JSH|1|g|A|16
8JSH|1|g|U|17
8JSH|1|g|C|18
8JSH|1|g|A|19
8JSH|1|g|U|20
8JSH|1|g|G|21
8JSH|1|g|G|22
Current chains
- Chain g
- 16S ribosomal RNA
Nearby chains
- Chain k
- 30S ribosomal protein S5
- Chain t
- Small ribosomal subunit protein uS12
Coloring options: