HL_8K2A_053

3D structure

PDB id

8K2A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome with Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UCAACAAA

Length

8 nucleotides

Bulged bases

8K2A|1|S1|C|473, 8K2A|1|S1|A|478

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8K2A|1|S1|U|468
8K2A|1|S1|C|473
8K2A|1|S1|A|474
8K2A|1|S1|A|475
8K2A|1|S1|C|476
8K2A|1|S1|A|477
8K2A|1|S1|A|478
8K2A|1|S1|A|479

Current chains

Chain S1

12S rRNA

Nearby chains

Chain SB

Small ribosomal subunit protein uS2m

Chain SE

Small ribosomal subunit protein uS5m

Chain SF

Small ribosomal subunit protein bS6m

Chain SY

Small ribosomal subunit protein mS23

Chain Sm

Small ribosomal subunit protein mS37