HL_8OHD_047
3D structure
- PDB id
- 8OHD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAGGCCCGCCGGUGAAAUAC
- Length
- 20 nucleotides
- Bulged bases
- 8OHD|1|5|G|3973
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OHD|1|5|G|3971
8OHD|1|5|A|3972
8OHD|1|5|G|3973
8OHD|1|5|G|3974
8OHD|1|5|C|3975
8OHD|1|5|C|3976
8OHD|1|5|C|4038
8OHD|1|5|G|4039
8OHD|1|5|C|4040
8OHD|1|5|C|4041
8OHD|1|5|G|4042
8OHD|1|5|G|4043
8OHD|1|5|U|4044
8OHD|1|5|G|4045
8OHD|1|5|A|4046
8OHD|1|5|A|4047
8OHD|1|5|A|4048
8OHD|1|5|U|4049
8OHD|1|5|A|4050
8OHD|1|5|C|4051
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain A
- E3 UFM1-protein ligase 1
- Chain Lz
- 60S ribosomal protein L10a
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