HL_8OIP_026
3D structure
- PDB id
- 8OIP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 28S mammalian mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UUACAUAACAAAA
- Length
- 13 nucleotides
- Bulged bases
- 8OIP|1|AA|U|471, 8OIP|1|AA|A|476
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OIP|1|AA|U|466
8OIP|1|AA|U|467
8OIP|1|AA|A|468
8OIP|1|AA|C|469
8OIP|1|AA|A|470
8OIP|1|AA|U|471
8OIP|1|AA|A|472
8OIP|1|AA|A|473
8OIP|1|AA|C|474
8OIP|1|AA|A|475
8OIP|1|AA|A|476
8OIP|1|AA|A|477
8OIP|1|AA|A|478
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AE
- bS6m,Mitochondrial ribosomal protein S6
- Chain AS
- mS23
- Chain Ab
- Mitochondrial ribosomal protein S2
- Chain Ac
- Coiled-coil-helix-coiled-coil-helix domain containing 1
- Chain Ad
- 28S ribosomal protein S5, mitochondrial isoform X2
Coloring options: