HL_8OIQ_013

3D structure

PDB id

8OIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AACCCUAAAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIQ|1|B8|A|401
8OIQ|1|B8|A|402
8OIQ|1|B8|C|403
8OIQ|1|B8|C|404
8OIQ|1|B8|C|405
8OIQ|1|B8|U|406
8OIQ|1|B8|A|407
8OIQ|1|B8|A|408
8OIQ|1|B8|A|409
8OIQ|1|B8|U|410

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BD

Mitochondrial ribosomal protein L27

Chain BG

uL30m

Chain BU

uL16m

Chain Bn

Mitochondrial ribosomal protein L38

Chain Bw

39S ribosomal protein L48, mitochondrial