HL_8OIQ_015
3D structure
- PDB id
- 8OIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GAUACAAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIQ_015 not in the Motif Atlas
- Homologous match to HL_5J7L_160
- Geometric discrepancy: 0.2036
- The information below is about HL_5J7L_160
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_42998.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8OIQ|1|B8|G|462
8OIQ|1|B8|A|463
8OIQ|1|B8|U|464
8OIQ|1|B8|A|465
8OIQ|1|B8|C|466
8OIQ|1|B8|A|467
8OIQ|1|B8|A|468
8OIQ|1|B8|C|469
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BG
- uL30m
- Chain BP
- Mitochondrial ribosomal protein L10
- Chain BU
- uL16m
- Chain BY
- Mitochondrial ribosomal protein L20
- Chain BZ
- Mitochondrial ribosomal protein L21
- Chain Be
- Mitochondrial ribosomal protein L57
- Chain Bh
- Mitochondrial ribosomal protein S18A
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