HL_8OIQ_018
3D structure
- PDB id
- 8OIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UUGAAACA
- Length
- 8 nucleotides
- Bulged bases
- 8OIQ|1|B8|A|617, 8OIQ|1|B8|A|618
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIQ_018 not in the Motif Atlas
- Geometric match to HL_5E6M_002
- Geometric discrepancy: 0.2729
- The information below is about HL_5E6M_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_10874.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
8OIQ|1|B8|U|613
8OIQ|1|B8|U|614
8OIQ|1|B8|G|615
8OIQ|1|B8|A|616
8OIQ|1|B8|A|617
8OIQ|1|B8|A|618
8OIQ|1|B8|C|619
8OIQ|1|B8|A|620
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BN
- Mitochondrial ribosomal protein L4
- Chain BT
- 39S ribosomal protein L15, mitochondrial
- Chain Be
- Mitochondrial ribosomal protein L57
- Chain Bs
- 39S ribosomal protein L43, mitochondrial isoform X2
- Chain Bt
- mL44
- Chain By
- Mitochondrial ribosomal protein L50
- Chain Bz
- Mitochondrial ribosomal protein L51
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