HL_8OIQ_024

3D structure

PDB id

8OIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AGCAUUACUAGUAUU

Length

15 nucleotides

Bulged bases

8OIQ|1|B8|A|853, 8OIQ|1|B8|U|855, 8OIQ|1|B8|U|863

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIQ|1|B8|A|850
8OIQ|1|B8|G|851
8OIQ|1|B8|C|852
8OIQ|1|B8|A|853
8OIQ|1|B8|U|854
8OIQ|1|B8|U|855
8OIQ|1|B8|A|856
8OIQ|1|B8|C|857
8OIQ|1|B8|U|858
8OIQ|1|B8|A|859
8OIQ|1|B8|G|860
8OIQ|1|B8|U|861
8OIQ|1|B8|A|862
8OIQ|1|B8|U|863
8OIQ|1|B8|U|864

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BL

Mitochondrial ribosomal protein L2

Chain Bm

Mitochondrial ribosomal protein L37