HL_8OIQ_031

3D structure

PDB id

8OIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUACAAAAAACCC

Length

13 nucleotides

Bulged bases

8OIQ|1|B8|C|1167, 8OIQ|1|B8|A|1168, 8OIQ|1|B8|C|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIQ|1|B8|G|1164
8OIQ|1|B8|U|1165
8OIQ|1|B8|A|1166
8OIQ|1|B8|C|1167
8OIQ|1|B8|A|1168
8OIQ|1|B8|A|1169
8OIQ|1|B8|A|1170
8OIQ|1|B8|A|1171
8OIQ|1|B8|A|1172
8OIQ|1|B8|A|1173
8OIQ|1|B8|C|1174
8OIQ|1|B8|C|1175
8OIQ|1|B8|C|1176

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BD

Mitochondrial ribosomal protein L27

Chain BG

uL30m

Chain BU

uL16m

Chain Bn

Mitochondrial ribosomal protein L38

Chain Bw

39S ribosomal protein L48, mitochondrial