HL_8OIQ_041

3D structure

PDB id

8OIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UUAAUGAUUUAAUCUUAACCUAA

Length

23 nucleotides

Bulged bases

8OIQ|1|B8|U|1521, 8OIQ|1|B8|U|1527

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIQ|1|B8|U|1512
8OIQ|1|B8|U|1513
8OIQ|1|B8|A|1514
8OIQ|1|B8|A|1515
8OIQ|1|B8|U|1516
8OIQ|1|B8|G|1517
8OIQ|1|B8|A|1518
8OIQ|1|B8|U|1519
8OIQ|1|B8|U|1520
8OIQ|1|B8|U|1521
8OIQ|1|B8|A|1522
8OIQ|1|B8|A|1523
8OIQ|1|B8|U|1524
8OIQ|1|B8|C|1525
8OIQ|1|B8|U|1526
8OIQ|1|B8|U|1527
8OIQ|1|B8|A|1528
8OIQ|1|B8|A|1529
8OIQ|1|B8|C|1530
8OIQ|1|B8|C|1531
8OIQ|1|B8|U|1532
8OIQ|1|B8|A|1533
8OIQ|1|B8|A|1534

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BR

39S ribosomal protein L13, mitochondrial

Chain Bb

Mitochondrial ribosomal protein L53

Chain Bh

Mitochondrial ribosomal protein S18A

Chain Bl

Ribosomal protein