HL_8OIQ_042
3D structure
- PDB id
- 8OIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUAGAACAG
- Length
- 9 nucleotides
- Bulged bases
- 8OIQ|1|B8|U|1558
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIQ_042 not in the Motif Atlas
- Geometric match to HL_7RQB_068
- Geometric discrepancy: 0.1425
- The information below is about HL_7RQB_068
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_64690.1
- Basepair signature
- cWW-cSW-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8OIQ|1|B8|C|1557
8OIQ|1|B8|U|1558
8OIQ|1|B8|A|1559
8OIQ|1|B8|G|1560
8OIQ|1|B8|A|1561
8OIQ|1|B8|A|1562
8OIQ|1|B8|C|1563
8OIQ|1|B8|A|1564
8OIQ|1|B8|G|1565
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BH
- Mitochondrial ribosomal protein L32
- Chain BM
- ICT1
- Chain BV
- bL17m
- Chain BX
- 39S ribosomal protein L19, mitochondrial
Coloring options: