HL_8OIQ_043
3D structure
- PDB id
- 8OIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UUAAAUUAUCAAA
- Length
- 13 nucleotides
- Bulged bases
- 8OIQ|1|B9|U|17, 8OIQ|1|B9|C|21
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIQ_043 not in the Motif Atlas
- Homologous match to HL_4YYE_001
- Geometric discrepancy: 0.2176
- The information below is about HL_4YYE_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OIQ|1|B9|U|12
8OIQ|1|B9|U|13
8OIQ|1|B9|A|14
8OIQ|1|B9|A|15
8OIQ|1|B9|A|16
8OIQ|1|B9|U|17
8OIQ|1|B9|U|18
8OIQ|1|B9|A|19
8OIQ|1|B9|U|20
8OIQ|1|B9|C|21
8OIQ|1|B9|A|22
8OIQ|1|B9|A|23
8OIQ|1|B9|A|24
Current chains
- Chain B9
- CP Phe-tRNA
Nearby chains
- Chain BW
- Mitochondrial ribosomal protein L18
- Chain Ba
- 39S ribosomal protein L52, mitochondrial
- Chain Bn
- Mitochondrial ribosomal protein L38
Coloring options: