HL_8OIQ_048

3D structure

PDB id

8OIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUAACUAAUAAUAUAC

Length

16 nucleotides

Bulged bases

8OIQ|1|B8|A|689

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIQ|1|B8|G|682
8OIQ|1|B8|U|683
8OIQ|1|B8|A|684
8OIQ|1|B8|A|685
8OIQ|1|B8|C|686
8OIQ|1|B8|U|687
8OIQ|1|B8|A|688
8OIQ|1|B8|A|689
8OIQ|1|B8|U|690
8OIQ|1|B8|A|691
8OIQ|1|B8|A|692
8OIQ|1|B8|U|693
8OIQ|1|B8|A|694
8OIQ|1|B8|U|695
8OIQ|1|B8|A|696
8OIQ|1|B8|C|697

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BA

uL22m

Chain BB

39S ribosomal protein L23, mitochondrial

Chain BV

bL17m

Chain Bi

39S ribosomal protein S30, mitochondrial

Chain Bu

Mitochondrial ribosomal protein L45