HL_8OIQ_049

3D structure

PDB id

8OIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

ACCAAAACAACACUAAAACGU

Length

21 nucleotides

Bulged bases

8OIQ|1|B8|C|725, 8OIQ|1|B8|A|727, 8OIQ|1|B8|A|732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIQ|1|B8|A|718
8OIQ|1|B8|C|719
8OIQ|1|B8|C|720
8OIQ|1|B8|A|721
8OIQ|1|B8|A|722
8OIQ|1|B8|A|723
8OIQ|1|B8|A|724
8OIQ|1|B8|C|725
8OIQ|1|B8|A|726
8OIQ|1|B8|A|727
8OIQ|1|B8|C|728
8OIQ|1|B8|A|729
8OIQ|1|B8|C|730
8OIQ|1|B8|U|731
8OIQ|1|B8|A|732
8OIQ|1|B8|A|733
8OIQ|1|B8|A|734
8OIQ|1|B8|A|735
8OIQ|1|B8|C|736
8OIQ|1|B8|G|737
8OIQ|1|B8|U|738

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BL

Mitochondrial ribosomal protein L2

Chain Bm

Mitochondrial ribosomal protein L37