HL_8OIT_014

3D structure

PDB id

8OIT (explore in PDB, NAKB, or RNA 3D Hub)

Description

39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AACCCUCUAAAU

Length

12 nucleotides

Bulged bases

8OIT|1|B8|U|399, 8OIT|1|B8|C|400, 8OIT|1|B8|U|401

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIT|1|B8|A|394
8OIT|1|B8|A|395
8OIT|1|B8|C|396
8OIT|1|B8|C|397
8OIT|1|B8|C|398
8OIT|1|B8|U|399
8OIT|1|B8|C|400
8OIT|1|B8|U|401
8OIT|1|B8|A|402
8OIT|1|B8|A|403
8OIT|1|B8|A|404
8OIT|1|B8|U|405

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BD

39S ribosomal protein L27, mitochondrial

Chain BG

39S ribosomal protein L30, mitochondrial

Chain BU

39S ribosomal protein L16, mitochondrial

Chain Bn

39S ribosomal protein L38, mitochondrial

Chain Bw

39S ribosomal protein L48, mitochondrial