HL_8OIT_025

3D structure

PDB id

8OIT (explore in PDB, NAKB, or RNA 3D Hub)

Description

39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AGCAUCACCAGUAUU

Length

15 nucleotides

Bulged bases

8OIT|1|B8|A|851, 8OIT|1|B8|C|853, 8OIT|1|B8|U|861

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIT|1|B8|A|848
8OIT|1|B8|G|849
8OIT|1|B8|C|850
8OIT|1|B8|A|851
8OIT|1|B8|U|852
8OIT|1|B8|C|853
8OIT|1|B8|A|854
8OIT|1|B8|C|855
8OIT|1|B8|C|856
8OIT|1|B8|A|857
8OIT|1|B8|G|858
8OIT|1|B8|U|859
8OIT|1|B8|A|860
8OIT|1|B8|U|861
8OIT|1|B8|U|862

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BL

39S ribosomal protein L2, mitochondrial

Chain Bm

39S ribosomal protein L37, mitochondrial