HL_8OIT_033
3D structure
- PDB id
- 8OIT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUUCACCAG
- Length
- 9 nucleotides
- Bulged bases
- 8OIT|1|B8|U|1194, 8OIT|1|B8|C|1195
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIT_033 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.2088
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8OIT|1|B8|C|1192
8OIT|1|B8|U|1193
8OIT|1|B8|U|1194
8OIT|1|B8|C|1195
8OIT|1|B8|A|1196
8OIT|1|B8|C|1197
8OIT|1|B8|C|1198
8OIT|1|B8|A|1199
8OIT|1|B8|G|1200
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BD
- 39S ribosomal protein L27, mitochondrial
- Chain BK
- 39S ribosomal protein L35, mitochondrial
- Chain BT
- 39S ribosomal protein L15, mitochondrial
- Chain Bn
- 39S ribosomal protein L38, mitochondrial
Coloring options: