HL_8OIT_040
3D structure
- PDB id
- 8OIT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UCACAA
- Length
- 6 nucleotides
- Bulged bases
- 8OIT|1|B8|C|1487
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIT_040 not in the Motif Atlas
- Geometric match to HL_5FMZ_001
- Geometric discrepancy: 0.1595
- The information below is about HL_5FMZ_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19413.2
- Basepair signature
- cWW-cSW-F
- Number of instances in this motif group
- 9
Unit IDs
8OIT|1|B8|U|1484
8OIT|1|B8|C|1485
8OIT|1|B8|A|1486
8OIT|1|B8|C|1487
8OIT|1|B8|A|1488
8OIT|1|B8|A|1489
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BM
- 39S ribosomal protein L3, mitochondrial
- Chain BS
- 39S ribosomal protein L14, mitochondrial
- Chain BV
- 39S ribosomal protein L17, mitochondrial
- Chain BX
- 39S ribosomal protein L19, mitochondrial
Coloring options: