HL_8OJ0_050

3D structure

PDB id

8OJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

60S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUCAAACGGUAACGC

Length

15 nucleotides

Bulged bases

8OJ0|1|5|A|4214, 8OJ0|1|5|C|4221

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OJ0|1|5|G|4209
8OJ0|1|5|U|4210
8OJ0|1|5|C|4211
8OJ0|1|5|A|4212
8OJ0|1|5|A|4213
8OJ0|1|5|A|4214
8OJ0|1|5|C|4215
8OJ0|1|5|G|4216
8OJ0|1|5|G|4217
8OJ0|1|5|U|4218
8OJ0|1|5|A|4219
8OJ0|1|5|A|4220
8OJ0|1|5|C|4221
8OJ0|1|5|G|4222
8OJ0|1|5|C|4223

Current chains

Chain 5

28S rRNA

Nearby chains

Chain LI

Ribosomal protein uL16-like

Chain LT

60S ribosomal protein L21

Chain Lb

60S ribosomal protein L29