HL_8OJ8_069
3D structure
- PDB id
- 8OJ8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GUGAAUUGCAGGACAUGAUC
- Length
- 20 nucleotides
- Bulged bases
- 8OJ8|1|8|A|80, 8OJ8|1|8|C|81, 8OJ8|1|8|U|86
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OJ8|1|8|G|68
8OJ8|1|8|U|69
8OJ8|1|8|G|70
8OJ8|1|8|A|71
8OJ8|1|8|A|72
8OJ8|1|8|U|73
8OJ8|1|8|U|74
8OJ8|1|8|G|75
8OJ8|1|8|C|76
8OJ8|1|8|A|77
8OJ8|1|8|G|78
8OJ8|1|8|G|79
8OJ8|1|8|A|80
8OJ8|1|8|C|81
8OJ8|1|8|A|82
8OJ8|1|8|U|86
8OJ8|1|8|G|87
8OJ8|1|8|A|88
8OJ8|1|8|U|89
8OJ8|1|8|C|90
Current chains
- Chain 8
- 5.8S rRNA
Nearby chains
- Chain 2
- Protein transport protein Sec61 subunit gamma
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain LY
- 60S ribosomal protein L26
- Chain Lh
- 60S ribosomal protein L35
- Chain Lj
- 60S ribosomal protein L37
- Chain Ll
- 60S ribosomal protein L39
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