HL_8OLZ_004

3D structure

PDB id

8OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and intronistat B after 2h30 soaking

Experimental method

X-RAY DIFFRACTION

Resolution

3.31 Å

Loop

Sequence

UGCAUAACAA

Length

10 nucleotides

Bulged bases

8OLZ|1|A|G|179, 8OLZ|1|A|C|180

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OLZ|1|A|U|178
8OLZ|1|A|G|179
8OLZ|1|A|C|180
8OLZ|1|A|A|181
8OLZ|1|A|U|182
8OLZ|1|A|A|183
8OLZ|1|A|A|184
8OLZ|1|A|C|185
8OLZ|1|A|A|186
8OLZ|1|A|A|187

Current chains

Chain A

DOMAINS 1-5

Nearby chains

Chain B

5'-exon