HL_8OO0_071

3D structure

PDB id

8OO0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

8OO0|1|1|U|3292

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8OO0_071 not in the Motif Atlas

Geometric match to HL_4L8H_001

Geometric discrepancy: 0.129

The information below is about HL_4L8H_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

8OO0|1|1|C|3291
8OO0|1|1|U|3292
8OO0|1|1|U|3293
8OO0|1|1|G|3294

Current chains

Chain 1

28S rRNA

Nearby chains

Chain SI

40S ribosomal protein S8