HL_8OO0_118

3D structure

PDB id

8OO0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUUAAACCAUAACGC

Length

15 nucleotides

Bulged bases

8OO0|1|1|A|2596, 8OO0|1|1|C|2603

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OO0|1|1|G|2591
8OO0|1|1|U|2592
8OO0|1|1|U|2593
8OO0|1|1|A|2594
8OO0|1|1|A|2595
8OO0|1|1|A|2596
8OO0|1|1|C|2597
8OO0|1|1|C|2598
8OO0|1|1|A|2599
8OO0|1|1|U|2600
8OO0|1|1|A|2601
8OO0|1|1|A|2602
8OO0|1|1|C|2603
8OO0|1|1|G|2604
8OO0|1|1|C|2605

Current chains

Chain 1

28S rRNA

Nearby chains

Chain LI

60S ribosomal protein L10-like protein

Chain LT

60S ribosomal protein l21-like protein

Chain Lb

60S ribosomal protein L29