HL_8P03_023
3D structure
- PDB id
- 8P03 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 48S late-stage initiation complex with m6A mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- CUAUUUUGUUGGUUUUCGG
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P03_023 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.3264
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8P03|1|2|C|880
8P03|1|2|U|881
8P03|1|2|A|882
8P03|1|2|U|883
8P03|1|2|U|884
8P03|1|2|U|885
8P03|1|2|U|886
8P03|1|2|G|887
8P03|1|2|U|888
8P03|1|2|U|889
8P03|1|2|G|890
8P03|1|2|G|891
8P03|1|2|U|892
8P03|1|2|U|893
8P03|1|2|U|894
8P03|1|2|U|895
8P03|1|2|C|896
8P03|1|2|G|897
8P03|1|2|G|898
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain I
- 40S ribosomal protein S6
- Chain N
- 40S ribosomal protein S11
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