HL_8P16_080

3D structure

PDB id

8P16 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

8P16|1|2|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P16_080 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2791

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8P16|1|2|G|462
8P16|1|2|U|463
8P16|1|2|U|464
8P16|1|2|A|465
8P16|1|2|A|466
8P16|1|2|U|467
8P16|1|2|A|468
8P16|1|2|C|469
8P16|1|2|C|470

Current chains

Chain 2

16S rRNA

Nearby chains