HL_8P17_025

3D structure

PDB id

8P17 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CAUCCCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P17_025 not in the Motif Atlas

Homologous match to HL_7RQB_026

Geometric discrepancy: 0.4964

The information below is about HL_7RQB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56241.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

15

Unit IDs

8P17|1|1|C|885
8P17|1|1|A|886
8P17|1|1|U|887
8P17|1|1|C|888
8P17|1|1|C|889
8P17|1|1|C|890
8P17|1|1|G|891

Current chains

Chain 1

23S rRNA

Nearby chains

Chain r

Small ribosomal subunit protein uS13