HL_8P17_080

3D structure

PDB id

8P17 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

8P17|1|2|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P17_080 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2793

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8P17|1|2|G|462
8P17|1|2|U|463
8P17|1|2|U|464
8P17|1|2|A|465
8P17|1|2|A|466
8P17|1|2|U|467
8P17|1|2|A|468
8P17|1|2|C|469
8P17|1|2|C|470

Current chains

Chain 2

16S RNA

Nearby chains