HL_8P18_018

3D structure

PDB id

8P18 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

CGAAUAG

Length

7 nucleotides

Bulged bases

8P18|1|1|U|615

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P18_018 not in the Motif Atlas

Geometric match to HL_5TBW_025

Geometric discrepancy: 0.2253

The information below is about HL_5TBW_025

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

8P18|1|1|C|611
8P18|1|1|G|612
8P18|1|1|A|613
8P18|1|1|A|614
8P18|1|1|U|615
8P18|1|1|A|616
8P18|1|1|G|617

Current chains

Chain 1

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L4