HL_8P18_021

3D structure

PDB id

8P18 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

GGUAACAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P18_021 not in the Motif Atlas

Homologous match to HL_5J7L_154

Geometric discrepancy: 0.1068

The information below is about HL_5J7L_154

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8P18|1|1|G|712
8P18|1|1|G|713
8P18|1|1|U|714
8P18|1|1|A|715
8P18|1|1|A|716
8P18|1|1|C|717
8P18|1|1|A|718
8P18|1|1|C|719

Current chains

Chain 1

23S rRNA

Nearby chains

Chain 2

Small subunit ribosomal RNA; SSU rRNA

Chain t

Small ribosomal subunit protein uS15