HL_8P18_063

3D structure

PDB id

8P18 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P18_063 not in the Motif Atlas

Homologous match to HL_7RQB_064

Geometric discrepancy: 0.0606

The information below is about HL_7RQB_064

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

8P18|1|1|C|2658
8P18|1|1|G|2659
8P18|1|1|A|2660
8P18|1|1|G|2661
8P18|1|1|A|2662
8P18|1|1|G|2663

Current chains

Chain 1

23S rRNA

Nearby chains

Chain 6

Peptide chain release factor RF2

Chain F

50S ribosomal protein L6