HL_8P18_087

3D structure

PDB id

8P18 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

CUAACG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P18_087 not in the Motif Atlas

Homologous match to HL_4LFB_019

Geometric discrepancy: 0.0619

The information below is about HL_4LFB_019

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.3

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

8P18|1|2|C|862
8P18|1|2|U|863
8P18|1|2|A|864
8P18|1|2|A|865
8P18|1|2|C|866
8P18|1|2|G|867

Current chains

Chain 2

16S rRNA

Nearby chains

Chain j

Small ribosomal subunit protein uS5