HL_8P18_100

3D structure

PDB id

8P18 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

G(2MG)G(MA6)(MA6)C

Length

6 nucleotides

Bulged bases

8P18|1|2|G|1517

QA status

Modified nucleotides: 2MG, MA6

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P18_100 not in the Motif Atlas

Homologous match to HL_6CZR_103

Geometric discrepancy: 0.0893

The information below is about HL_6CZR_103

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

8P18|1|2|G|1515
8P18|1|2|2MG|1516
8P18|1|2|G|1517
8P18|1|2|MA6|1518
8P18|1|2|MA6|1519
8P18|1|2|C|1520

Current chains

Chain 2

16S rRNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA