HL_8P18_107

3D structure

PDB id

8P18 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

8P18|1|1|U|1729, 8P18|1|1|C|1730, 8P18|1|1|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P18_107 not in the Motif Atlas

Homologous match to HL_5J7L_214

Geometric discrepancy: 0.3407

The information below is about HL_5J7L_214

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

8P18|1|1|C|1727
8P18|1|1|C|1728
8P18|1|1|U|1729
8P18|1|1|C|1730
8P18|1|1|G|1731
8P18|1|1|C|1732
8P18|1|1|G|1733

Current chains

Chain 1

23S rRNA

Nearby chains