HL_8P2F_077
3D structure
- PDB id
- 8P2F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.44 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P2F_077 not in the Motif Atlas
- Homologous match to HL_6UFG_007
- Geometric discrepancy: 0.0906
- The information below is about HL_6UFG_007
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
8P2F|1|F|G|31
8P2F|1|F|C|32
8P2F|1|F|U|33
8P2F|1|F|C|34
8P2F|1|F|A|35
8P2F|1|F|U|36
8P2F|1|F|A|37
8P2F|1|F|A|38
8P2F|1|F|C|39
Current chains
- Chain F
- tRNA
Nearby chains
- Chain D
- Transfer RNA; tRNA
- Chain E
- Elongation factor G
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain b
- mRNA
- Chain j
- 30S ribosomal protein S9
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