HL_8P2F_083

3D structure

PDB id

8P2F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.44 Å

Loop

Sequence

UCUUG

Length

5 nucleotides

Bulged bases

8P2F|1|a|C|219, 8P2F|1|a|U|221

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P2F_083 not in the Motif Atlas

Homologous match to HL_4LFB_005

Geometric discrepancy: 0.329

The information below is about HL_4LFB_005

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

8P2F|1|a|U|218
8P2F|1|a|C|219
8P2F|1|a|U|220
8P2F|1|a|U|221
8P2F|1|a|G|222

Current chains

Chain a

16S ribosomal RNA

Nearby chains