HL_8P2G_022

3D structure

PDB id

8P2G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.02 Å

Loop

Sequence

GGUAACAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P2G_022 not in the Motif Atlas

Homologous match to HL_5J7L_154

Geometric discrepancy: 0.1418

The information below is about HL_5J7L_154

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8P2G|1|A|G|757
8P2G|1|A|G|758
8P2G|1|A|U|759
8P2G|1|A|A|760
8P2G|1|A|A|761
8P2G|1|A|C|762
8P2G|1|A|A|763
8P2G|1|A|C|764

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain a

Small subunit ribosomal RNA; SSU rRNA

Chain p

30S ribosomal protein S15