HL_8P2G_060

3D structure

PDB id

8P2G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.02 Å

Loop

Sequence

CGCAUGGAAG

Length

10 nucleotides

Bulged bases

8P2G|1|A|C|2433

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P2G_060 not in the Motif Atlas

Homologous match to HL_7RQB_059

Geometric discrepancy: 0.0849

The information below is about HL_7RQB_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40210.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

12

Unit IDs

8P2G|1|A|C|2431
8P2G|1|A|G|2432
8P2G|1|A|C|2433
8P2G|1|A|A|2434
8P2G|1|A|U|2435
8P2G|1|A|G|2436
8P2G|1|A|G|2437
8P2G|1|A|A|2438
8P2G|1|A|A|2439
8P2G|1|A|G|2440

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain O

50S ribosomal protein L15