HL_8P2G_062
3D structure
- PDB id
- 8P2G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.02 Å
Loop
- Sequence
- UGUAGUCG
- Length
- 8 nucleotides
- Bulged bases
- 8P2G|1|A|G|2556
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P2G_062 not in the Motif Atlas
- Homologous match to HL_4WF9_057
- Geometric discrepancy: 0.1037
- The information below is about HL_4WF9_057
- Detailed Annotation
- GNRA variation
- Broad Annotation
- GNRA variation
- Motif group
- HL_31585.4
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 20
Unit IDs
8P2G|1|A|U|2555
8P2G|1|A|G|2556
8P2G|1|A|U|2557
8P2G|1|A|A|2558
8P2G|1|A|G|2559
8P2G|1|A|U|2560
8P2G|1|A|C|2561
8P2G|1|A|G|2562
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 9
- 50S ribosomal protein L36
- Chain E
- Elongation factor G
- Chain K
- 50S ribosomal protein L6
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