HL_8P2G_069

3D structure

PDB id

8P2G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.02 Å

Loop

Sequence

AAAGAUGAU

Length

9 nucleotides

Bulged bases

8P2G|1|A|A|2840

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P2G_069 not in the Motif Atlas

Homologous match to HL_5J7L_201

Geometric discrepancy: 0.0874

The information below is about HL_5J7L_201

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

8P2G|1|A|A|2839
8P2G|1|A|A|2840
8P2G|1|A|A|2841
8P2G|1|A|G|2842
8P2G|1|A|A|2843
8P2G|1|A|U|2844
8P2G|1|A|G|2845
8P2G|1|A|A|2846
8P2G|1|A|U|2847

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain H

50S ribosomal protein L3

Chain Q

50S ribosomal protein L17