HL_8P2G_073
3D structure
- PDB id
- 8P2G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.02 Å
Loop
- Sequence
- CAGCCUGGUAG
- Length
- 11 nucleotides
- Bulged bases
- 8P2G|1|D|C|16, 8P2G|1|D|G|18, 8P2G|1|D|G|19, 8P2G|1|D|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P2G_073 not in the Motif Atlas
- Homologous match to HL_4LCK_001
- Geometric discrepancy: 0.1449
- The information below is about HL_4LCK_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8P2G|1|D|C|13
8P2G|1|D|A|14
8P2G|1|D|G|15
8P2G|1|D|C|16
8P2G|1|D|C|17
8P2G|1|D|U|17|||A
8P2G|1|D|G|18
8P2G|1|D|G|19
8P2G|1|D|U|20
8P2G|1|D|A|21
8P2G|1|D|G|22
Current chains
- Chain D
- tRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: