HL_8P2G_097

3D structure

PDB id

8P2G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.02 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P2G_097 not in the Motif Atlas

Homologous match to HL_4LFB_024

Geometric discrepancy: 0.0971

The information below is about HL_4LFB_024

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

8P2G|1|a|C|1087
8P2G|1|a|G|1088
8P2G|1|a|U|1089
8P2G|1|a|G|1090
8P2G|1|a|A|1091
8P2G|1|a|G|1092

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain c

30S ribosomal protein S2

Chain f

30S ribosomal protein S5