HL_8P2G_104

3D structure

PDB id

8P2G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.02 Å

Loop

Sequence

UUUUA

Length

5 nucleotides

Bulged bases

8P2G|1|a|U|1463

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P2G_104 not in the Motif Atlas

Geometric match to HL_4WF9_003

Geometric discrepancy: 0.2543

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

8P2G|1|a|U|1460
8P2G|1|a|U|1461
8P2G|1|a|U|1462
8P2G|1|a|U|1463
8P2G|1|a|A|1464

Current chains

Chain a

16S ribosomal RNA

Nearby chains