HL_8P2K_018

3D structure

PDB id

8P2K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and METAP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAGGUGAAAU(PSU)C

Length

12 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P2K|1|A2|G|957
8P2K|1|A2|A|958
8P2K|1|A2|G|959
8P2K|1|A2|G|960
8P2K|1|A2|U|961
8P2K|1|A2|G|962
8P2K|1|A2|A|963
8P2K|1|A2|A|964
8P2K|1|A2|A|965
8P2K|1|A2|U|966
8P2K|1|A2|PSU|967
8P2K|1|A2|C|968

Current chains

Chain A2

18s rRNA

Nearby chains

Chain Aa

40S ribosomal protein S3a

Chain Ae

Ribosomal protein S5

Chain An

40S ribosomal protein S14

Chain B5

Large subunit ribosomal RNA; LSU rRNA