HL_8P2K_049

3D structure

PDB id

8P2K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and METAP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUCCGC

Length

6 nucleotides

Bulged bases

8P2K|1|B5|C|775

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P2K_049 not in the Motif Atlas

Geometric match to HL_5Y85_004

Geometric discrepancy: 0.1552

The information below is about HL_5Y85_004

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

62

Unit IDs

8P2K|1|B5|G|773
8P2K|1|B5|U|774
8P2K|1|B5|C|775
8P2K|1|B5|C|776
8P2K|1|B5|G|777
8P2K|1|B5|C|778

Current chains

Chain B5

28S rRNA

Nearby chains