HL_8P2K_070
3D structure
- PDB id
- 8P2K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and METAP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- ACGAGAACU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P2K_070 not in the Motif Atlas
- Homologous match to HL_8C3A_031
- Geometric discrepancy: 0.1395
- The information below is about HL_8C3A_031
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_43993.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
8P2K|1|B5|A|2219
8P2K|1|B5|C|2220
8P2K|1|B5|G|2221
8P2K|1|B5|A|2222
8P2K|1|B5|G|2223
8P2K|1|B5|A|2224
8P2K|1|B5|A|2225
8P2K|1|B5|C|2226
8P2K|1|B5|U|2227
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BP
- uL22
- Chain BR
- Ribosomal protein L19
- Chain Bd
- 60S ribosomal protein L31
- Chain Na
- Nascent polypeptide-associated complex subunit alpha
- Chain Nb
- Transcription factor BTF3
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