HL_8P2K_126

3D structure

PDB id

8P2K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and METAP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGGUUCCGG

Length

9 nucleotides

Bulged bases

8P2K|1|B5|C|2552, 8P2K|1|B5|G|2554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P2K|1|B5|C|2547
8P2K|1|B5|G|2548
8P2K|1|B5|G|2549
8P2K|1|B5|U|2550
8P2K|1|B5|U|2551
8P2K|1|B5|C|2552
8P2K|1|B5|C|2553
8P2K|1|B5|G|2554
8P2K|1|B5|G|2555

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BR

Ribosomal protein L19

Chain BU

60S ribosomal protein L22

Chain BX

Ribosomal_L23eN domain-containing protein

Chain MA

Methionine aminopeptidase 1

Chain Nb

Transcription factor BTF3