HL_8P85_091
3D structure
- PDB id
- 8P85 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Fluorolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- AUUUUGUUGGUUUCU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P85_091 not in the Motif Atlas
- Geometric match to HL_8P9A_236
- Geometric discrepancy: 0.2363
- The information below is about HL_8P9A_236
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_88364.4
- Basepair signature
- cWW-cWW-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8P85|1|A|A|829
8P85|1|A|U|830
8P85|1|A|U|831
8P85|1|A|U|832
8P85|1|A|U|833
8P85|1|A|G|834
8P85|1|A|U|835
8P85|1|A|U|836
8P85|1|A|G|837
8P85|1|A|G|838
8P85|1|A|U|839
8P85|1|A|U|840
8P85|1|A|U|841
8P85|1|A|C|842
8P85|1|A|U|843
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain M
- 40S ribosomal protein S11-A
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