HL_8P85_141

3D structure

PDB id

8P85 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Fluorolissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UGAUUUUAUGCAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P85|1|AR|U|1564
8P85|1|AR|G|1565
8P85|1|AR|A|1566
8P85|1|AR|U|1567
8P85|1|AR|U|1568
8P85|1|AR|U|1569
8P85|1|AR|U|1570
8P85|1|AR|A|1571
8P85|1|AR|U|1572
8P85|1|AR|G|1573
8P85|1|AR|C|1574
8P85|1|AR|A|1575
8P85|1|AR|G|1576

Current chains

Chain AR

25S ribosomal RNA

Nearby chains

Chain AT

5.8S ribosomal RNA; 5.8S rRNA

Chain CZ

60S ribosomal protein L25